Lexus RX 2004-09 :: 2005 RX330 - Lost ALL Windows Control After Replacing Front Door Speakers

I recently replaced my front door speakers in my 2005 RX330. Upon reassembling everything I had the following issues:

1) The front Passenger side window and rear seat windows would not roll down from the driver's side controls. This issue was resolved by going to each individual window control and rolling the window down halfway and then rolling them all the way up and continuing to press on the window control in the "Up" position for an additional 5 seconds or so.

2) My original Lexus key (non-remote) would work for staring the car, but it would no longer work to unlock the doors by inserting it into the Driver's side door lock and moving the key toward the front of the car.

3) In attempting to resolve issue #2, I disconnected the Car battery for a couple of hours and reconnected it, which leads me to my big problem(s). Now none of my windows will roll down from ANY window control (including the front door driver's window). In addition, the doors can only be locked/unlocked from the Lexus Key Remote or from the front Passenger door lock control.

I have checked all fuses that I could get to (under the hood and under the drivers side dash panel) but I still cannot get the windows or door locks to function normally. I could not get to one big blue fuse under the dash panel right next to the fusebox that I believe is related to the power windows. I am not sure if it also fuses the sunroof, which DOES function. I pulled the Negative Battery cable off a second time and did another reset but to no avail.